Although Hibiki and the crew defeated a massive Earth battleship at the end of the first stage, they spotted five more battleships further ahead, aiming at Mejeiru and Tarahk. The crew of the Nirvana learned that their home planets, Tarahk and Mejeiru, were facing the crisis of Karitori (reaping). They sped up their journey home to inform them of the danger. Along the way, Misty, a girl who had joined them on the trip, brought current information about Earth that was worse than they could have imagined. Hibiki and the crew realized that a true battle lay in their future. Under the attack of an increasingly violent enemy, Vandread is finally transformed into its final system. Can they save their home? And what will happen to the relationship between Hibiki and Dita?